References
- LAMMPS (Molecular Dynamics Simulations) https://lammps.sandia.gov/
- https://www.openacc.org/
- https://www.openmp.org/
- BLAST (Basic Local Alignment Search Tool) https://blast.ncbi.nlm.nih.gov/Blast.cgi
- VASP (Vienna Ab initio Simulation Package) https://www.vasp.at/
- Gaussian (Computational Chemistry Software) https://gaussian.com/
- https://computing.llnl.gov/tutorials/mpi/
- CUDA (Parallel Computing Platform and API) https://developer.nvidia.com/cuda-zone
- https://www.mmm.ucar.edu/weather-research-and-forecasting-model
- GROMACS (Molecular Dynamics Simulations) http://www.gromacs.org/
- OpenFOAM (Computational Fluid Dynamics) https://www.openfoam.com/
- SLURM (Simple Linux Utility for Resource Management) https://slurm.schedmd.com/
- https://www.tutorialspoint.com/gnu_debugger/what_is_gdb.htm
- https://nsmindia.in/
- https://en.wikipedia.org/wiki/Deep_learning
- https://docs.conda.io/en/latest/miniconda.html
- https://www.tensorflow.org/
- https://github.com/PaddlePaddle/Paddle
- Keras, https://keras.io/
- Pytorch, https://pytorch.org
- https://mxnet.apache.org
- https://software.intel.com/en-us/distribution-for-python
- https://software.intel.com/en-us/articles/intel-optimization-for-tensorflow-installation-guide
- NAMD (Molecular Dynamics Simulations) https://www.ks.uiuc.edu/Research/namd/
- ANSYS (Engineering Simulation Software) https://www.ansys.com/
- MPI (Message Passing Interface) https://www.mpi-forum.org/
- AMBER (Assisted Model Building with Energy Refinement) https://ambermd.org/
- CHARMM (Chemistry at HARvard Macromolecular Mechanics) https://www.charmm.org/